global report | global report investigating novel coronavirus haplotypes

Lineages of interest 2020-12-24



Table 1 | Summary of data

Lineage Country Sequence count Earliest sequence Travel history
B.1.1.7 UK 100.0%, Denmark 0.0%, Netherlands 0.0%, Australia 0.0%, Singapore 0.0% 3454 2020-09-20
B.1.351 South_Africa 100.0%, UK 0.0% 204 2020-10-08

Lineage B.1.1.7

Table B.1.1.7 | Lineage B.1.1.7

Statistic Information
Count 3454
SNPs aa:orf1ab:T1001I aa:orf1ab:A1708D aa:orf1ab:I2230T del:11288:9 del:21765:6 del:21991:3 aa:S:N501Y aa:S:A570D aa:S:P681H aa:S:T716I aa:S:S982A aa:S:D1118H aa:Orf8:Q27* aa:Orf8:R52I aa:Orf8:Y73C aa:N:D3L aa:N:S235F

Figure 1 | Map By Date B.1.1.7

2020-12-24T11:30:10.463632 image/svg+xml Matplotlib v3.3.3, https://matplotlib.org/

Figure 2 | Map Sequence Counts B.1.1.7

2020-12-24T11:30:10.742674 image/svg+xml Matplotlib v3.3.3, https://matplotlib.org/

Figure 3 | Bar Chart Country Counts B.1.1.7

2020-12-24T11:30:11.044492 image/svg+xml Matplotlib v3.3.3, https://matplotlib.org/

Lineage B.1.351

Table B.1.351 | Lineage B.1.351

Statistic Information
Count 204
SNPs aa:orf1ab:K1655N aa:S:D215G aa:S:E484K aa:S:N501Y snp:C23664T

Figure 4 | Map By Date B.1.351

2020-12-24T11:30:12.253399 image/svg+xml Matplotlib v3.3.3, https://matplotlib.org/

Figure 5 | Map Sequence Counts B.1.351

2020-12-24T11:30:12.524477 image/svg+xml Matplotlib v3.3.3, https://matplotlib.org/

Figure 6 | Bar Chart Country Counts B.1.351

2020-12-24T11:30:12.747407 image/svg+xml Matplotlib v3.3.3, https://matplotlib.org/